Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826862.1_cds_XP_016502849.1_16445
CDS Infomation

[gene=LOC107820988] [db_xref=GeneID:107820988] [protein=protein EXECUTER 1, chloroplastic-like] [protein_id=XP_016502849.1] [location=join(26545..27006,28741..28857,29627..29692,30068..30174,31179..31260,31930..32634,32711..32834,32997..33166,33570..33644,33806..33898,34003..34095)] [gbkey=CDS]
Sequence

ATGGCGTCGATTGCTCCGCCGCCGACATTCGATGTAAACACTCACAAATTCAACTTCTCA
AACCCTAAGTTCACCTCCCGATTGAAGCGTTCATCTTCATCATTCACTTCTCAGGCTTTT
TCCACCGCTCATTCCGTCTCTAGGGTTTCCGGTTCAGCTTTCTGCTGCCGTTGCCGGAAC
GGCACCGGCGATGGCGAGACAGCTGAGCCGTCTCCATCAGCTTCTTCTCAGAACAGCTCT
TCATCTTCTTCTTGGAGATGGGACTTGGCGTTTCAGGATGCTGTTAGGAATGCGATGAAG
AAGTTCGATGATTACGTGAATTGGTCCAAAGGAGCCGAGCTTGCTGAGAGGAGTAGTGCG
GAGAAGGAAGTCTGTGTTGATGGCGAAGAATGGGGTTGGGAGCGGTGGAAAAAGCATTTC
ACTGAGGTTGAGGAGGAGGAACGGTTGGTTTCTGTTTTAAAGTCACAGTTGGCTCATGCT
ATTAGTAGGGAAGATTATGAAGATGCTGCTAAACTCAAGGTGGGCATTGCAGCTGCAGCT
ACTAAAGACATTGTTGGAAGAGTGATGTCCCGTCTAAATAAAGCTGTTGAAGAAGAGCAG
TACAAGGATGCAATATTTATGCGTGATTATGCTGGTACAGGATTGGTTGGATGGTGGGCT
GGAACTTCAGAAGACGTTAATGATCCATATGGCCGCATTATTCGTATAAGTGCTGAGCAT
GGAAGATATGTGGCGAAAAGTTACAGTCCGCGCCAGCTCGCTTCGGCTGTTGAAGGTGCC
CCTCTTTTTGAAATATTTCTTACCGTGGATGATAAAGGCGAATACAGGCAACAGGCTGTT
TACTTGAAGAGAAAACCAGTTCAGCAAGATTTACCTATTCCTTCTTCAAAGCTACCTGGT
GCTATCAGTAACTTGGACACTCTTAGTCCCACTGAAAACAAAAGTGATATGTTTGATAAA
ATCTCAGATGCTGAGGAAGATGCTGAAGATAGGGATGATGAGTTTGGCTTTCAGAATGCA
CTGAGAGACATGATTCCAGGGGTACAGGTCAAGGTTTTAAAAGTGACAGCTCCAGGGAAG
GTAGATAGAGATCTAATATCAAAGGTCATTGAGCAAATAATGGATGAGGAAGATGAAGAT
GAAGAAAAGGACTTTGATTTAGACAGCATGGACGATGAAGATGAAATTAAGGTGGAAAAA
GATGGAGAGCAGAATGTGATTGAATTGGATACAGACAATGGGGTTAGTGATGGCGAAGAG
CAGAGCCAAATTGCGGTTAGGGTGGTTGTTGGTGGTCTTATGCAAAATACTTCAAGTGGT
GTACAGCATAAAGACCTGTTTCGAGTACCGGCAAGGCTAGAGAAGAAGGGTCACCTGTCA
TTTACTTTCAGTATAGAGGAAGATGAGAACAAACGCAATTCCTCTGGCAGTGGACAATTT
CCCCCAGATAAAAAGGCTAGGCTCCAAGGTCAACGTAGCTTGGATCATGTGATGCTTGAT
CTTGCAAAGTTCATCGGGAAGGGGAAGATACCTATGAAGGTCCTTAAAGATATGGGGGAG
TTGATCAGCCTCACTCTTACTCAGGCACGAAATCGTCAACCACTGTCGAAGTCAACTACC
TTTAACCGCATTGAGATTTCAGCATCTACGGACCCACTAAATGGATTATATATTGGTGCT
CATGGTCTGTACACTTCGGAAGTCATCCACCTTAGGCGAAGATTTGGTCAGTGGAAAGAA
GAAGGTAGCCCTAAGGAGTCTTCACGTTTAGAGTTTTACGAGTATGTTGAAGCTGTAAAA
TTAACTGGAGATTCTTATGTGCCAGCTGGTCAGATAGCATTCCGCGCAAGAATTGGAAAA
AAATATCAACTTCCACACAAAGGGATTATTCCAGAAGAATTTGGTGTGATTGCTCGATAC
AGGGGACAAGGAAGGCTGGCGGAACCTGGTTTTCGAAAACCCAGATGGGTTGATGGTGAA
CTGGTTATCCTAGATGGAAAGTACATTAAAGGAGGGCCTGTTGTGGGTTTTGTTTACTGG
GACCCTGAATATCATTTCTTAGTGTTCTTCCATCGGCTTAGGCTGCAGGAGTGA

Peptide Sequence

PEP ID

XP_016502849.1
PEP Infomation

PREDICTED: protein EXECUTER 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASIAPPPTFDVNTHKFNFSNPKFTSRLKRSSSSFTSQAFSTAHSVSRVSGSAFCCRCRN
GTGDGETAEPSPSASSQNSSSSSSWRWDLAFQDAVRNAMKKFDDYVNWSKGAELAERSSA
EKEVCVDGEEWGWERWKKHFTEVEEEERLVSVLKSQLAHAISREDYEDAAKLKVGIAAAA
TKDIVGRVMSRLNKAVEEEQYKDAIFMRDYAGTGLVGWWAGTSEDVNDPYGRIIRISAEH
GRYVAKSYSPRQLASAVEGAPLFEIFLTVDDKGEYRQQAVYLKRKPVQQDLPIPSSKLPG
AISNLDTLSPTENKSDMFDKISDAEEDAEDRDDEFGFQNALRDMIPGVQVKVLKVTAPGK
VDRDLISKVIEQIMDEEDEDEEKDFDLDSMDDEDEIKVEKDGEQNVIELDTDNGVSDGEE
QSQIAVRVVVGGLMQNTSSGVQHKDLFRVPARLEKKGHLSFTFSIEEDENKRNSSGSGQF
PPDKKARLQGQRSLDHVMLDLAKFIGKGKIPMKVLKDMGELISLTLTQARNRQPLSKSTT
FNRIEISASTDPLNGLYIGAHGLYTSEVIHLRRRFGQWKEEGSPKESSRLEFYEYVEAVK
LTGDSYVPAGQIAFRARIGKKYQLPHKGIIPEEFGVIARYRGQGRLAEPGFRKPRWVDGE
LVILDGKYIKGGPVVGFVYWDPEYHFLVFFHRLRLQE

Transcript Sequence

Gene sequence data has not been registered.